Sequence Similarity Clusters for the Entities in PDB 1B8A

Entity #1 | Chains: A,B
PROTEIN (ASPARTYL-TRNA SYNTHETASE) protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33966
95 % 1 4 8736 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 4 8669
70 % 1 4 8321
50 % 1 4 7631
40 % 1 7 3782
30 % 3 18 1610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures