Sequence Similarity Clusters for the Entities in PDB 1B88

Entity #1 | Chains: A,B
T CELL RECEPTOR V-ALPHA DOMAIN protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44954
95 % 1 1 33687 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 32222
70 % 4 5 7446
50 % 4 5 6855
40 % 571 882 5
30 % 640 1008 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.