Sequence Similarity Clusters for the Entities in PDB 1B86

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN; ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 160 222 22
95 % 185 250 20 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 186 251 21
70 % 229 332 16
50 % 540 754 4
40 % 545 759 8
30 % 991 1226 8
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN; BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 121 169 51
95 % 191 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 195 255 19
70 % 245 346 14
50 % 541 754 4
40 % 546 759 8
30 % 992 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures