Sequence Similarity Clusters for the Entities in PDB 1B86

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN; ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 154 214 23
95 % 181 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 182 246 21
70 % 225 327 15
50 % 532 744 4
40 % 537 749 8
30 % 967 1200 8
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN; BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 117 164 51
95 % 187 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 191 250 19
70 % 241 341 13
50 % 533 744 4
40 % 538 749 8
30 % 968 1200 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.