Sequence Similarity Clusters for the Entities in PDB 1B86

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN; ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 154 209 26
95 % 181 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 182 241 35
70 % 225 322 17
50 % 532 734 5
40 % 537 739 8
30 % 959 1182 8
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN; BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 117 159 53
95 % 187 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 191 245 32
70 % 241 336 13
50 % 533 734 5
40 % 538 739 8
30 % 960 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.