Sequence Similarity Clusters for the Entities in PDB 1B7Y

Entity #1 | Chains: A
PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 7127
95 % 2 9 7699 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 2 9 7644
70 % 2 9 7436
50 % 2 9 6854
40 % 4 15 2881
30 % 4 15 2689
Entity #2 | Chains: B
PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 5642
95 % 2 12 5341 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 2 12 5365
70 % 2 12 5277
50 % 2 12 5031
40 % 2 12 4759
30 % 6 20 2094

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures