Sequence Similarity Clusters for the Entities in PDB 1B7X

Entity #1 | Chains: A
PROTEIN (THROMBIN LIGHT CHAIN) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 247 334 52
95 % 251 342 63 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 251 342 67
70 % 251 342 80
50 % 251 342 111
40 % 251 342 135
30 % 251 342 145
Entity #2 | Chains: B
PROTEIN (THROMBIN HEAVY CHAIN) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 248 332 53
95 % 279 378 52 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 282 385 56
70 % 288 409 47
50 % 288 409 85
40 % 1433 1884 4
30 % 1441 1898 7
Entity #3 | Chains: C
PROTEIN (INHIBITOR) protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures