Sequence Similarity Clusters for the Entities in PDB 1B7F

Entity #1 | Chains: P,Q
RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3') rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (SXL-LETHAL PROTEIN) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43080
95 % 1 3 10584 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 4.2
PDBFlex
90 % 1 3 10438
70 % 1 3 9910
50 % 1 3 8983
40 % 4 8 4596
30 % 7 13 3143

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.