Sequence Similarity Clusters for the Entities in PDB 1B7F

Entity #1 | Chains: P,Q
RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3') rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (SXL-LETHAL PROTEIN) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45869
95 % 1 3 11469 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 4.1
PDBFlex
90 % 1 3 11309
70 % 1 3 10253
50 % 1 3 9234
40 % 4 8 4722
30 % 7 17 2643

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures