Sequence Similarity Clusters for the Entities in PDB 1B6J

Entity #1 | Chains: A,B
RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5860
95 % 293 580 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 317 642 2
70 % 331 669 5
50 % 336 695 5
40 % 340 705 9
30 % 342 707 14
Entity #2 | Chains: C
CYCLIC PEPTIDE INHIBITOR protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.