Sequence Similarity Clusters for the Entities in PDB 1B6C

Entity #1 | Chains: A,C,E,G
FK506-BINDING PROTEIN protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 48 496
95 % 39 52 582 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 39 52 612
70 % 45 84 239
50 % 59 103 217
40 % 108 158 174
30 % 123 177 171
Entity #2 | Chains: B,D,F,H
TGF-B SUPERFAMILY RECEPTOR TYPE I protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 22 1180
95 % 25 29 1194 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.2
PDBFlex
90 % 25 29 1221
70 % 25 29 1245
50 % 40 44 555
40 % 49 53 534
30 % 3950 4473 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures