Sequence Similarity Clusters for the Entities in PDB 1B67

Entity #1 | Chains: A,B
PROTEIN (HISTONE HMFA) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29269
95 % 1 2 25588 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 2 24700
70 % 1 6 5401
50 % 1 7 4475
40 % 1 7 4223
30 % 1 7 3815

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1B67 1 A, B PROTEIN (HISTONE HMFA) 2180
2 1A7W 1 A HISTONE HMFB 2180
3 1HTA 1 A HISTONE HMFA 2180
4 1B6W 1 A PROTEIN (HISTONE HMFB) THIS IS A SELENOMETHIONINE PROTEIN. RESIDUES 1 AND 35 ARE SEMET (BUT SIDE CHAIN OF RESIDUE 1 IS DISORDERED) 2180
5 1KU5 1 A, B HPhA 53953
6 5T5K 1 A, B, C, D, E, F DNA-binding protein HMf-2 2180
7 1BFM 1 A, B HISTONE B 2180