Sequence Similarity Clusters for the Entities in PDB 1B67

Entity #1 | Chains: A,B
PROTEIN (HISTONE HMFA) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29725
95 % 1 2 25960 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 2 25041
70 % 1 6 5485
50 % 1 7 4545
40 % 1 7 4301
30 % 1 7 3887

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1B67 1 A, B PROTEIN (HISTONE HMFA) 2180
2 1A7W 1 A HISTONE HMFB 2180
3 1HTA 1 A HISTONE HMFA 2180
4 1B6W 1 A PROTEIN (HISTONE HMFB) THIS IS A SELENOMETHIONINE PROTEIN. RESIDUES 1 AND 35 ARE SEMET (BUT SIDE CHAIN OF RESIDUE 1 IS DISORDERED) 2180
5 1KU5 1 A, B HPhA 53953
6 5T5K 1 A, B, C, D, E, F DNA-binding protein HMf-2 2180
7 1BFM 1 A, B HISTONE B 2180