Sequence Similarity Clusters for the Entities in PDB 1B5F

Entity #1 | Chains: A,C
PROTEIN (CARDOSIN A) protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37681
95 % 1 1 29019 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 28022
70 % 1 1 25340
50 % 1 1 21705
40 % 1 1 19112
30 % 1 1 16195
Entity #2 | Chains: B,D
PROTEIN (CARDOSIN A) protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46097
95 % 1 1 34438 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 32940
70 % 1 1 29368
50 % 1 1 25153
40 % 1 1 22183
30 % 1 1 18773

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.