Sequence Similarity Clusters for the Entities in PDB 1B52

Entity #1 | Chains: A
PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 32 1200
95 % 31 32 1623 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.5
PDBFlex
90 % 31 32 1660
70 % 35 36 1057
50 % 35 36 1100
40 % 38 39 1032
30 % 41 42 932
Entity #2 | Chains: B
PROTEIN (LYS-THR-LYS) protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.