Sequence Similarity Clusters for the Entities in PDB 1B4H

Entity #1 | Chains: A
PERIPLASMIC OLIGO-PEPTIDE BINDING PROTEIN protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 32 1170
95 % 21 32 1589 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.5
PDBFlex
90 % 21 32 1625
70 % 21 36 1032
50 % 21 36 1071
40 % 22 39 1015
30 % 24 42 917
Entity #2 | Chains: B
LYS-DAB-LYS PEPTIDE protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.