Sequence Similarity Clusters for the Entities in PDB 1B42

Entity #1 | Chains: A
VP39 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5433
95 % 15 22 2370 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 15 22 2430
70 % 15 22 2420
50 % 15 22 2408
40 % 15 22 2379
30 % 15 22 2279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.