Sequence Similarity Clusters for the Entities in PDB 1B41

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 18 1336
95 % 18 19 1694 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 20 21 1621
70 % 99 107 174
50 % 231 249 104
40 % 231 249 127
30 % 309 341 73
Entity #2 | Chains: B
FASCICULIN-2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7553
95 % 8 10 7457 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 10 7404
70 % 9 11 6389
50 % 22 37 1369
40 % 50 124 303
30 % 51 126 303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures