Sequence Similarity Clusters for the Entities in PDB 1B41

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 18 1306
95 % 18 19 1673
90 % 20 21 1601
70 % 99 107 170
50 % 226 243 105
40 % 226 243 130
30 % 297 328 76
Entity #2 | Chains: B
FASCICULIN-2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7445
95 % 8 10 7357 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 10 7310
70 % 9 11 6306
50 % 22 37 1349
40 % 50 123 297
30 % 51 125 296

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.