Sequence Similarity Clusters for the Entities in PDB 1B41

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 19 1598
95 % 18 19 1876 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 20 21 1788
70 % 99 107 181
50 % 240 260 107
40 % 242 263 127
30 % 320 354 73
Entity #2 | Chains: B
FASCICULIN-2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 8217
95 % 8 10 7364 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 10 7322
70 % 9 11 6355
50 % 22 38 1398
40 % 51 126 341
30 % 56 134 306

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures