Sequence Similarity Clusters for the Entities in PDB 1B41

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 18 1289
95 % 18 19 1648 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 20 21 1574
70 % 98 106 170
50 % 225 242 103
40 % 225 242 129
30 % 295 325 77
Entity #2 | Chains: B
FASCICULIN-2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 7349
95 % 8 10 7230
90 % 8 10 7188
70 % 9 11 6197
50 % 22 37 1337
40 % 50 121 298
30 % 51 123 301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.