Sequence Similarity Clusters for the Entities in PDB 1B3T

Entity #1 | Chains: C,D
DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*AP*TP*AP*TP*GP*CP*TP*TP*CP*CP*C)-3') dna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (NUCLEAR PROTEIN EBNA1) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45695
95 % 2 3 7469
90 % 2 4 6197
70 % 2 4 6038
50 % 2 4 5664
40 % 2 4 5316
30 % 2 4 4784

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures