Sequence Similarity Clusters for the Entities in PDB 1B3T

Entity #1 | Chains: C,D
DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*AP*TP*AP*TP*GP*CP*TP*TP*CP*CP*C)-3') dna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (NUCLEAR PROTEIN EBNA1) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44831
95 % 2 3 7320
90 % 2 4 6070
70 % 2 4 5919
50 % 2 4 5560
40 % 2 4 5222
30 % 2 4 4693

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures