Sequence Similarity Clusters for the Entities in PDB 1B34

Entity #1 | Chains: A
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1) protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 726
95 % 2 11 997 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 2 11 1023
70 % 2 12 1023
50 % 2 12 1062
40 % 2 12 1075
30 % 2 25 746
Entity #2 | Chains: B
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 672
95 % 2 12 920 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.9
PDBFlex
90 % 2 12 951
70 % 2 12 981
50 % 2 25 684
40 % 2 25 713
30 % 2 25 713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.