Sequence Similarity Clusters for the Entities in PDB 1B34

Entity #1 | Chains: A
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1) protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 736
95 % 2 11 1003 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 2 11 1032
70 % 2 12 1040
50 % 2 12 1078
40 % 2 12 1089
30 % 2 25 760
Entity #2 | Chains: B
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 678
95 % 2 12 924 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.6
PDBFlex
90 % 2 12 957
70 % 2 12 990
50 % 2 25 706
40 % 2 25 735
30 % 2 25 734

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.