Sequence Similarity Clusters for the Entities in PDB 1B34

Entity #1 | Chains: A
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1) protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 748
95 % 2 11 1019 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 11 1046
70 % 2 12 1055
50 % 2 12 1092
40 % 2 12 1105
30 % 2 26 760
Entity #2 | Chains: B
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 691
95 % 2 12 942 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.8
PDBFlex
90 % 2 12 976
70 % 2 12 1006
50 % 2 26 710
40 % 2 26 736
30 % 2 26 734

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures