Sequence Similarity Clusters for the Entities in PDB 1B2W

Entity #1 | Chains: L
PROTEIN (ANTIBODY (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 24952
95 % 2 3 22064 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 495 780 2
70 % 1609 2553 1
50 % 3273 5180 1
40 % 3715 5834 1
30 % 4593 7269 1
Entity #2 | Chains: H
PROTEIN (ANTIBODY (HEAVY CHAIN)) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52396
95 % 1 1 43204
90 % 1 1 41133
70 % 1581 2511 2
50 % 3274 5180 1
40 % 3716 5834 1
30 % 4594 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures