Sequence Similarity Clusters for the Entities in PDB 1B2U

Entity #1 | Chains: A,B,C
PROTEIN (BARNASE) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 33 406
95 % 37 48 323 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.7
PDBFlex
90 % 37 48 335
70 % 42 54 337
50 % 42 54 406
40 % 42 54 431
30 % 42 54 438
Entity #2 | Chains: D,E,F
PROTEIN (BARSTAR) protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 2062
95 % 7 18 1268 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 7 18 1290
70 % 7 18 1314
50 % 7 18 1364
40 % 7 18 1356
30 % 7 18 1347

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures