Sequence Similarity Clusters for the Entities in PDB 1B2U

Entity #1 | Chains: A,B,C
PROTEIN (BARNASE) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13751
95 % 37 48 296 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 37 48 308
70 % 42 54 306
50 % 42 54 361
40 % 42 54 388
30 % 42 54 389
Entity #2 | Chains: D,E,F
PROTEIN (BARSTAR) protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29416
95 % 7 18 1177 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 7 18 1204
70 % 7 18 1241
50 % 7 18 1294
40 % 7 18 1307
30 % 7 18 1283

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.