Sequence Similarity Clusters for the Entities in PDB 1B2U

Entity #1 | Chains: A,B,C
PROTEIN (BARNASE) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14457
95 % 37 48 320 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 37 48 334
70 % 42 54 334
50 % 42 54 400
40 % 42 54 422
30 % 42 54 421
Entity #2 | Chains: D,E,F
PROTEIN (BARSTAR) protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30755
95 % 7 18 1241 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 7 18 1267
70 % 7 18 1298
50 % 7 18 1357
40 % 7 18 1364
30 % 7 18 1341

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures