Sequence Similarity Clusters for the Entities in PDB 1B2M

Entity #1 | Chains: C,D,E
5'-R(*GP*(U34))-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
RIBONUCLEASE T1 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 7389
95 % 51 68 365 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 51 68 388
70 % 51 68 425
50 % 55 74 482
40 % 63 82 447
30 % 63 82 447

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.