Sequence Similarity Clusters for the Entities in PDB 1B27

Entity #1 | Chains: A,B,C
PROTEIN (BARNASE) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 20 734
95 % 33 48 318 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 33 48 332
70 % 37 54 333
50 % 37 54 399
40 % 37 54 421
30 % 37 54 420
Entity #2 | Chains: D,E,F
PROTEIN (BARSTAR) protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 4619
95 % 6 18 1239 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 6 18 1265
70 % 6 18 1296
50 % 6 18 1356
40 % 6 18 1364
30 % 6 18 1340

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures