Sequence Similarity Clusters for the Entities in PDB 1B27

Entity #1 | Chains: A,B,C
PROTEIN (BARNASE) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 20 713
95 % 33 48 304 Flexibility: Low
Max RMSD: 17.3, Avg RMSD: 0.8
PDBFlex
90 % 33 48 315
70 % 37 54 314
50 % 37 54 370
40 % 37 54 393
30 % 37 54 395
Entity #2 | Chains: D,E,F
PROTEIN (BARSTAR) protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 4422
95 % 6 18 1189 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 6 18 1218
70 % 6 18 1257
50 % 6 18 1310
40 % 6 18 1320
30 % 6 18 1295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.