Sequence Similarity Clusters for the Entities in PDB 1B23

Entity #1 | Chains: R
CYSTEINYL TRNA rna, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
ELONGATION FACTOR TU protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 5642
95 % 12 25 1313 Flexibility: Medium
Max RMSD: 12.2, Avg RMSD: 5.7
PDBFlex
90 % 12 26 1311
70 % 28 65 445
50 % 30 67 504
40 % 30 67 546
30 % 42 93 400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.