Sequence Similarity Clusters for the Entities in PDB 1B1H

Entity #1 | Chains: A
PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 32 1187
95 % 17 32 1605 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.5
PDBFlex
90 % 17 32 1642
70 % 17 36 1043
50 % 17 36 1088
40 % 18 39 1025
30 % 20 42 930
Entity #2 | Chains: B
PROTEIN (LYS HPE LYS) protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.