Sequence Similarity Clusters for the Entities in PDB 1B11

Entity #1 | Chains: A
PROTEIN (Feline Immunodeficiency Virus PROTEASE) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28269
95 % 7 9 4971 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 8 10 4701
70 % 8 10 4612
50 % 8 10 4434
40 % 382 699 7
30 % 384 701 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.