Sequence Similarity Clusters for the Entities in PDB 1B11

Entity #1 | Chains: A
PROTEIN (Feline Immunodeficiency Virus PROTEASE) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20400
95 % 7 9 5455 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 8 10 5164
70 % 8 10 5018
50 % 8 10 4785
40 % 395 716 8
30 % 397 718 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures