Sequence Similarity Clusters for the Entities in PDB 1B11

Entity #1 | Chains: A
PROTEIN (Feline Immunodeficiency Virus PROTEASE) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28602
95 % 7 9 5048 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 8 10 4771
70 % 8 10 4686
50 % 8 10 4498
40 % 381 699 7
30 % 383 701 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.