Sequence Similarity Clusters for the Entities in PDB 1B0R

Entity #1 | Chains: A
PROTEIN (HLA-A*0201) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 198 204 51
95 % 247 254 57 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 295 302 35
70 % 688 716 6
50 % 690 721 6
40 % 736 772 10
30 % 844 896 15
Entity #2 | Chains: B
PROTEIN (HLA-A*0201) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 583 616 2
95 % 626 660 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 635 669 4
70 % 863 912 4
50 % 881 934 3
40 % 881 934 7
30 % 881 934 12
Entity #3 | Chains: C
PROTEIN (INFLUENZA MATRIX PEPTIDE) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.