Sequence Similarity Clusters for the Entities in PDB 1B0R

Entity #1 | Chains: A
PROTEIN (HLA-A*0201) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 205 212 58
95 % 249 257 59 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 303 311 36
70 % 717 746 6
50 % 728 760 7
40 % 774 812 9
30 % 886 939 13
Entity #2 | Chains: B
PROTEIN (HLA-A*0201) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 640 675 2
95 % 654 690 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 663 699 4
70 % 902 953 4
50 % 920 975 3
40 % 920 975 6
30 % 920 975 9
Entity #3 | Chains: C
PROTEIN (INFLUENZA MATRIX PEPTIDE) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures