Sequence Similarity Clusters for the Entities in PDB 1B0R

Entity #1 | Chains: A
PROTEIN (HLA-A*0201) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 198 204 52
95 % 248 255 57 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 301 308 35
70 % 699 727 6
50 % 701 732 6
40 % 747 783 10
30 % 855 907 15
Entity #2 | Chains: B
PROTEIN (HLA-A*0201) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 590 624 2
95 % 633 668 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 642 677 4
70 % 872 922 4
50 % 890 944 3
40 % 890 944 7
30 % 890 944 12
Entity #3 | Chains: C
PROTEIN (INFLUENZA MATRIX PEPTIDE) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures