Sequence Similarity Clusters for the Entities in PDB 1B0G

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 197 52
95 % 217 246 58
90 % 262 294 36
70 % 606 692 6
50 % 608 697 6
40 % 648 748 10
30 % 716 868 15
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 523 600 2
95 % 561 644 3
90 % 570 653 4
70 % 742 885 4
50 % 756 907 3
40 % 756 907 9
30 % 756 907 14
Entity #3 | Chains: C,F
PEPTIDE P1049 (ALWGFFPVL) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.