Sequence Similarity Clusters for the Entities in PDB 1B0G

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 197 50
95 % 217 246 56
90 % 256 286 33
70 % 574 656 7
50 % 576 661 7
40 % 613 709 11
30 % 678 826 14
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 502 577 2
95 % 539 620 3
90 % 548 629 4
70 % 715 856 5
50 % 727 876 4
40 % 727 876 9
30 % 727 876 13
Entity #3 | Chains: C,F
PEPTIDE P1049 (ALWGFFPVL) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.