Sequence Similarity Clusters for the Entities in PDB 1B05

Entity #1 | Chains: A
PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 32 1125
95 % 28 32 1546
90 % 28 32 1580
70 % 29 36 1014
50 % 29 36 1055
40 % 32 39 1005
30 % 34 42 904
Entity #2 | Chains: B
PEPTIDE LYS-CYS-LYS protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.