Sequence Similarity Clusters for the Entities in PDB 1B04

Entity #1 | Chains: A,B
PROTEIN (DNA LIGASE) protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36750
95 % 1 1 28918 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 27911
70 % 1 1 25188
50 % 27 28 1731
40 % 27 29 1695
30 % 27 29 1667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures