Sequence Similarity Clusters for the Entities in PDB 1AZS

Entity #1 | Chains: A
VC1 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 16 3360
95 % 1 16 4136 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 16 4166
70 % 1 16 4103
50 % 1 16 3957
40 % 1 16 3779
30 % 1 16 3521
Entity #2 | Chains: B
IIC2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 17 2847
95 % 2 17 3547 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 2 17 3599
70 % 2 17 3550
50 % 2 17 3458
40 % 2 17 3344
30 % 7 22 2252
Entity #3 | Chains: C
GS-ALPHA protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 4690
95 % 1 20 2909 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 1 20 2954
70 % 1 20 2917
50 % 1 20 2881
40 % 29 97 360
30 % 29 99 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.