Sequence Similarity Clusters for the Entities in PDB 1AZQ

Entity #1 | Chains: B,C
DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D) protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 10879
95 % 6 16 3822 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 6 16 3865
70 % 9 26 2056
50 % 9 26 2059
40 % 9 26 2060
30 % 9 26 1987

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.