Sequence Similarity Clusters for the Entities in PDB 1AYY

Entity #1 | Chains: A,C
GLYCOSYLASPARAGINASE protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10436
95 % 3 4 10138 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 3 4 10006
70 % 3 4 9507
50 % 3 4 8612
40 % 3 4 7834
30 % 3 4 6794
Entity #2 | Chains: B,D
GLYCOSYLASPARAGINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10435
95 % 3 4 10137 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 3 4 10005
70 % 3 4 9506
50 % 3 4 8611
40 % 3 4 7833
30 % 8 10 2888

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures