Sequence Similarity Clusters for the Entities in PDB 1AYY

Entity #1 | Chains: A,C
GLYCOSYLASPARAGINASE protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9568
95 % 3 4 9711 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 3 4 9597
70 % 3 4 9158
50 % 3 4 8283
40 % 3 4 7599
30 % 3 4 6702
Entity #2 | Chains: B,D
GLYCOSYLASPARAGINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9615
95 % 3 4 9756 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 3 4 9638
70 % 3 4 9192
50 % 3 4 8317
40 % 3 4 7623
30 % 8 10 2888

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures