Sequence Similarity Clusters for the Entities in PDB 1AYY

Entity #1 | Chains: A,C
GLYCOSYLASPARAGINASE protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9254
95 % 3 4 9409 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 9310
70 % 3 4 8875
50 % 3 4 8023
40 % 3 4 7367
30 % 3 4 6505
Entity #2 | Chains: B,D
GLYCOSYLASPARAGINASE protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9299
95 % 3 4 9451 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 3 4 9349
70 % 3 4 8908
50 % 3 4 8056
40 % 3 4 7390
30 % 8 10 2794

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.