Sequence Similarity Clusters for the Entities in PDB 1AYN

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 6968
95 % 7 10 6741 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 7 10 6727
70 % 8 20 3060
50 % 8 20 3001
40 % 33 155 276
30 % 33 155 284
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 6995
95 % 7 10 6788 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6772
70 % 8 20 3076
50 % 32 157 295
40 % 32 157 309
30 % 43 192 164
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 6242
95 % 7 10 6841 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6821
70 % 8 20 3086
50 % 33 164 241
40 % 33 166 257
30 % 45 203 149
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 9674
95 % 7 9 7892 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 13 5094
70 % 8 13 5039
50 % 29 122 423
40 % 29 123 447
30 % 29 123 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.