Sequence Similarity Clusters for the Entities in PDB 1AYN

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7160
95 % 7 10 6931 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 7 10 6914
70 % 8 20 3141
50 % 8 20 3074
40 % 33 159 275
30 % 33 159 284
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7189
95 % 7 10 6983 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6964
70 % 8 20 3157
50 % 32 159 307
40 % 32 159 319
30 % 43 194 165
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 6417
95 % 7 10 7036 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 7013
70 % 8 20 3169
50 % 33 168 242
40 % 33 170 260
30 % 45 209 147
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 9937
95 % 7 9 8111 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 13 5281
70 % 8 13 5200
50 % 29 122 435
40 % 29 123 462
30 % 29 123 459

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.