Sequence Similarity Clusters for the Entities in PDB 1AYN

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7059
95 % 7 10 6834 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6817
70 % 8 20 3097
50 % 8 20 3033
40 % 33 158 273
30 % 33 158 282
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7088
95 % 7 10 6886 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6867
70 % 8 20 3113
50 % 32 159 293
40 % 32 159 310
30 % 43 194 165
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 6324
95 % 7 10 6941 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 7 10 6918
70 % 8 20 3124
50 % 33 167 239
40 % 33 169 255
30 % 45 208 146
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 9799
95 % 7 9 8002 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 13 5195
70 % 8 13 5125
50 % 29 122 428
40 % 29 123 455
30 % 29 123 454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.