Sequence Similarity Clusters for the Entities in PDB 1AYM

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 6830
95 % 1 10 6611 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 10 6597
70 % 1 20 3014
50 % 1 20 2947
40 % 5 149 283
30 % 5 149 289
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 6858
95 % 1 10 6656 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 10 6641
70 % 1 20 3031
50 % 4 151 305
40 % 4 151 317
30 % 7 186 166
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 6114
95 % 1 10 6705 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 10 6687
70 % 1 20 3041
50 % 5 158 249
40 % 5 160 264
30 % 8 197 151
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 16 COAT PROTEIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 9520
95 % 1 9 7757 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 13 5006
70 % 1 13 4948
50 % 4 117 432
40 % 4 118 460
30 % 4 118 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.