Sequence Similarity Clusters for the Entities in PDB 1AYB

Entity #1 | Chains: A
PROTEIN-TYROSINE PHOSPHATASE SYP (N-TERMINAL SH2 DOMAIN) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 7280
95 % 8 8 7834 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 8 8 7791
70 % 8 8 7518
50 % 8 8 6919
40 % 9 9 5911
30 % 154 228 153
Entity #2 | Chains: P
PEPTIDE IRS-1-895 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.