Sequence Similarity Clusters for the Entities in PDB 1AYA

Entity #1 | Chains: A,B
PROTEIN-TYROSINE PHOSPHATASE SYP (N-TERMINAL SH2 DOMAIN) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 7379
95 % 2 8 7953 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 8 7908
70 % 2 8 7668
50 % 2 8 7049
40 % 2 9 6024
30 % 92 228 156
Entity #2 | Chains: P,Q
PEPTIDE PDGFR-1009 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.