Sequence Similarity Clusters for the Entities in PDB 1AY1

Entity #1 | Chains: L
TP7 FAB protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41449
95 % 3 10 3576 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 28 146 143
70 % 761 2362 1
50 % 1560 4781 1
40 % 1560 4781 1
30 % 1748 5635 1
Entity #2 | Chains: H
TP7 FAB protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41195
95 % 1 2 31390 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 30067
70 % 752 2311 2
50 % 1561 4781 1
40 % 1561 4781 1
30 % 1749 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures