Sequence Similarity Clusters for the Entities in PDB 1AY1

Entity #1 | Chains: L
TP7 FAB protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41785
95 % 3 10 3615 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 28 148 145
70 % 822 2516 1
50 % 1685 5101 1
40 % 1959 5750 1
30 % 2389 7168 1
Entity #2 | Chains: H
TP7 FAB protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41784
95 % 1 2 35098 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 33534
70 % 815 2475 2
50 % 1686 5101 1
40 % 1960 5750 1
30 % 2390 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures