Sequence Similarity Clusters for the Entities in PDB 1AY1

Entity #1 | Chains: L
TP7 FAB protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40931
95 % 3 10 3524 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 28 145 141
70 % 734 2287 1
50 % 1505 4633 1
40 % 1505 4633 1
30 % 1689 5461 1
Entity #2 | Chains: H
TP7 FAB protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40682
95 % 1 2 31006 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 29712
70 % 726 2244 2
50 % 1506 4633 1
40 % 1506 4633 1
30 % 1690 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.