Sequence Similarity Clusters for the Entities in PDB 1AXT

Entity #1 | Chains: L
IMMUNOGLOBULIN IGG2A protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28674
95 % 64 148 151 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 69 158 148
70 % 840 2479 1
50 % 1717 5021 1
40 % 1717 5021 1
30 % 1957 5951 1
Entity #2 | Chains: H
IMMUNOGLOBULIN IGG2A protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28701
95 % 2 2 23890 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 2 2 23119
70 % 829 2429 2
50 % 1718 5021 1
40 % 1718 5021 1
30 % 1958 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures