Sequence Similarity Clusters for the Entities in PDB 1AXT

Entity #1 | Chains: L
IMMUNOGLOBULIN IGG2A protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28272
95 % 64 148 148 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 69 158 146
70 % 815 2426 1
50 % 1666 4913 1
40 % 1666 4913 1
30 % 1867 5780 1
Entity #2 | Chains: H
IMMUNOGLOBULIN IGG2A protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28300
95 % 2 2 23563 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 2 2 22808
70 % 804 2376 2
50 % 1667 4913 1
40 % 1667 4913 1
30 % 1868 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures