Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 414
95 % 13 28 453 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 13 28 493
70 % 14 30 490
50 % 15 33 491
40 % 16 53 325
30 % 31 86 224
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3522
95 % 4 5 3367
90 % 4 5 3420
70 % 4 5 3388
50 % 4 5 3300
40 % 4 5 3207
30 % 4 5 3014

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E0U 2 D, E, F Cyclin-dependent kinase inhibitor 1 9606
2 2ZVV 2 X, Y Cyclin-dependent kinase inhibitor 1 UNP residues 139-160 9606
3 1AXC 2 B, D, F P21/WAF1 22 C TERMINAL RESIDUES (139 - 160) 9606
4 2ZVW 2 I, J, K, L, M, N, O, P Cyclin-dependent kinase inhibitor 1 UNP residues 139-160 9606