Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 424
95 % 13 28 488 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 13 28 522
70 % 14 30 530
50 % 15 33 499
40 % 16 53 337
30 % 31 86 232
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3561
95 % 4 5 3403
90 % 4 5 3457
70 % 4 5 3424
50 % 4 5 3332
40 % 4 5 3232
30 % 4 5 3039

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E0U 1 A, B, C Proliferating cell nuclear antigen 9606
2 4RJF 1 A, C, E Proliferating cell nuclear antigen 9606
3 1U7B 1 A Proliferating cell nuclear antigen 9606
4 5MLO 1 A, C, E Proliferating cell nuclear antigen 9606
5 3VKX 1 A Proliferating cell nuclear antigen 9606
6 5E0V 1 A, B Proliferating cell nuclear antigen 9606
7 4ZTD 1 A, B, C Proliferating cell nuclear antigen UNP residues 2-254 9606
8 5YCO 1 A, B, C, D Proliferating cell nuclear antigen 9606
9 1VYM 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
10 5MOM 1 A, B, C Proliferating cell nuclear antigen 9606
11 2ZVM 1 A, B, C Proliferating cell nuclear antigen 9606
12 4D2G 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
13 1AXC 1 A, C, E PCNA 9606
14 5MLW 1 A, C, E Proliferating cell nuclear antigen 9606
15 5E0T 1 A, B, C Proliferating cell nuclear antigen 9606
16 1VYJ 1 A, C, E, G, I, K PROLIFERATING CELL NUCLEAR ANTIGEN 9606
17 3WGW 1 A, B Proliferating cell nuclear antigen 9606
18 2ZVL 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
19 2ZVK 1 A, B, C Proliferating cell nuclear antigen 9606
20 5MAV 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
21 1U76 1 A, C, E Proliferating cell nuclear antigen 9606
22 5IY4 1 A, C, E Proliferating cell nuclear antigen 9606
23 1UL1 2 A, B, C Proliferating cell nuclear antigen 9606
24 1W60 1 A, B PROLIFERATING CELL NUCLEAR ANTIGEN 9606
25 3TBL 1 A, B, C Proliferating cell nuclear antigen 9606
26 3P87 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
27 5L7C 1 A, B, C Proliferating cell nuclear antigen The original sequence starts from 1_Met. Our construct has N-ter residues -2_Gly, -1_Pro and 0_His. 9606
28 3JA9 1 A, B, C Proliferating cell nuclear antigen 9606