Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 25 411
95 % 14 29 479 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 14 29 515
70 % 15 31 519
50 % 16 34 488
40 % 18 60 326
30 % 33 93 230
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3652
95 % 4 5 3480
90 % 4 5 3547
70 % 4 5 3514
50 % 4 5 3421
40 % 4 5 3312
30 % 4 5 3116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E0U 1 A, B, C Proliferating cell nuclear antigen 9606
2 4RJF 1 A, C, E Proliferating cell nuclear antigen 9606
3 1U7B 1 A Proliferating cell nuclear antigen 9606
4 5MLO 1 A, C, E Proliferating cell nuclear antigen 9606
5 3VKX 1 A Proliferating cell nuclear antigen 9606
6 5E0V 1 A, B Proliferating cell nuclear antigen 9606
7 4ZTD 1 A, B, C Proliferating cell nuclear antigen UNP residues 2-254 9606
8 5YCO 1 A, B, C, D Proliferating cell nuclear antigen 9606
9 1VYM 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
10 5MOM 1 A, B, C Proliferating cell nuclear antigen 9606
11 2ZVM 1 A, B, C Proliferating cell nuclear antigen 9606
12 5YD8 1 X, Y, Z Proliferating cell nuclear antigen 9606
13 4D2G 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
14 1AXC 1 A, C, E PCNA 9606
15 5MLW 1 A, C, E Proliferating cell nuclear antigen 9606
16 5E0T 1 A, B, C Proliferating cell nuclear antigen 9606
17 1VYJ 1 A, C, E, G, I, K PROLIFERATING CELL NUCLEAR ANTIGEN 9606
18 3WGW 1 A, B Proliferating cell nuclear antigen 9606
19 2ZVL 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
20 2ZVK 1 A, B, C Proliferating cell nuclear antigen 9606
21 5MAV 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
22 1U76 1 A, C, E Proliferating cell nuclear antigen 9606
23 5IY4 1 A, C, E Proliferating cell nuclear antigen 9606
24 1UL1 2 A, B, C Proliferating cell nuclear antigen 9606
25 1W60 1 A, B PROLIFERATING CELL NUCLEAR ANTIGEN 9606
26 3TBL 1 A, B, C Proliferating cell nuclear antigen 9606
27 3P87 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
28 5L7C 1 A, B, C Proliferating cell nuclear antigen The original sequence starts from 1_Met. Our construct has N-ter residues -2_Gly, -1_Pro and 0_His. 9606
29 3JA9 1 A, B, C Proliferating cell nuclear antigen 9606