Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 422
95 % 13 28 485 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 13 28 517
70 % 14 30 524
50 % 15 33 492
40 % 16 53 333
30 % 31 86 228
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3529
95 % 4 5 3374
90 % 4 5 3428
70 % 4 5 3396
50 % 4 5 3303
40 % 4 5 3209
30 % 4 5 3016

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E0U 1 A, B, C Proliferating cell nuclear antigen 9606
2 4RJF 1 A, C, E Proliferating cell nuclear antigen 9606
3 1U7B 1 A Proliferating cell nuclear antigen 9606
4 5MLO 1 A, C, E Proliferating cell nuclear antigen 9606
5 3VKX 1 A Proliferating cell nuclear antigen 9606
6 4HK1 1 A Proliferating cell nuclear antigen 7227
7 2ZVV 1 A, B Proliferating cellular nuclear antigen 1 3702
8 5E0V 1 A, B Proliferating cell nuclear antigen 9606
9 4ZTD 1 A, B, C Proliferating cell nuclear antigen UNP residues 2-254 9606
10 5YCO 1 A, B, C, D Proliferating cell nuclear antigen 9606
11 1VYM 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
12 5MOM 1 A, B, C Proliferating cell nuclear antigen 9606
13 2ZVM 1 A, B, C Proliferating cell nuclear antigen 9606
14 4D2G 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
15 1AXC 1 A, C, E PCNA 9606
16 5TUP 1 A, B, C Proliferating cell nuclear antigen 746128
17 5MLW 1 A, C, E Proliferating cell nuclear antigen 9606
18 5E0T 1 A, B, C Proliferating cell nuclear antigen 9606
19 1VYJ 1 A, C, E, G, I, K PROLIFERATING CELL NUCLEAR ANTIGEN 9606
20 3WGW 1 A, B Proliferating cell nuclear antigen 9606
21 2ZVL 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
22 2ZVW 1 A, B, C, D, E, F, G, H Proliferating cell nuclear antigen 2 3702
23 2ZVK 1 A, B, C Proliferating cell nuclear antigen 9606
24 5MAV 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
25 1U76 1 A, C, E Proliferating cell nuclear antigen 9606
26 5IY4 1 A, C, E Proliferating cell nuclear antigen 9606
27 1UL1 2 A, B, C Proliferating cell nuclear antigen 9606
28 1W60 1 A, B PROLIFERATING CELL NUCLEAR ANTIGEN 9606
29 3TBL 1 A, B, C Proliferating cell nuclear antigen 9606
30 3P87 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
31 5L7C 1 A, B, C Proliferating cell nuclear antigen The original sequence starts from 1_Met. Our construct has N-ter residues -2_Gly, -1_Pro and 0_His. 9606
32 4CS5 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 6689
33 3JA9 1 A, B, C Proliferating cell nuclear antigen 9606