Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 424
95 % 13 28 488 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 13 28 522
70 % 14 30 530
50 % 15 33 499
40 % 16 53 337
30 % 31 86 232
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3561
95 % 4 5 3403
90 % 4 5 3457
70 % 4 5 3424
50 % 4 5 3332
40 % 4 5 3232
30 % 4 5 3039

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5E0U 1 A, B, C Proliferating cell nuclear antigen 9606
2 4RJF 1 A, C, E Proliferating cell nuclear antigen 9606
3 1U7B 1 A Proliferating cell nuclear antigen 9606
4 5MLO 1 A, C, E Proliferating cell nuclear antigen 9606
5 3VKX 1 A Proliferating cell nuclear antigen 9606
6 4HK1 1 A Proliferating cell nuclear antigen 7227
7 2ZVV 1 A, B Proliferating cellular nuclear antigen 1 3702
8 5E0V 1 A, B Proliferating cell nuclear antigen 9606
9 4ZTD 1 A, B, C Proliferating cell nuclear antigen UNP residues 2-254 9606
10 5YCO 1 A, B, C, D Proliferating cell nuclear antigen 9606
11 1PLQ 1 A PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) 4932
12 1VYM 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
13 5MOM 1 A, B, C Proliferating cell nuclear antigen 9606
14 2ZVM 1 A, B, C Proliferating cell nuclear antigen 9606
15 4D2G 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
16 1AXC 1 A, C, E PCNA 9606
17 5TUP 1 A, B, C Proliferating cell nuclear antigen 746128
18 5MLW 1 A, C, E Proliferating cell nuclear antigen 9606
19 5E0T 1 A, B, C Proliferating cell nuclear antigen 9606
20 1VYJ 1 A, C, E, G, I, K PROLIFERATING CELL NUCLEAR ANTIGEN 9606
21 3WGW 1 A, B Proliferating cell nuclear antigen 9606
22 3V60 2 B Proliferating cell nuclear antigen 4932
23 2ZVL 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
24 5H0T 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
25 2ZVW 1 A, B, C, D, E, F, G, H Proliferating cell nuclear antigen 2 3702
26 3GPN 1 A Proliferating cell nuclear antigen 4932
27 4L6P 1 A, B, C Proliferating cell nuclear antigen 4932
28 3V62 2 B, E Proliferating cell nuclear antigen 4932
29 2ZVK 1 A, B, C Proliferating cell nuclear antigen 9606
30 5MAV 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
31 1U76 1 A, C, E Proliferating cell nuclear antigen 9606
32 3V61 2 B Proliferating cell nuclear antigen 4932
33 5JNE 4 D, H Proliferating cell nuclear antigen 4932
34 6B8I 1 A, B, C Proliferating cell nuclear antigen 4932
35 5HAC 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
36 4L60 1 A Proliferating cell nuclear antigen 4932
37 5IY4 1 A, C, E Proliferating cell nuclear antigen 9606
38 5B7O 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
39 1UL1 2 A, B, C Proliferating cell nuclear antigen 9606
40 1W60 1 A, B PROLIFERATING CELL NUCLEAR ANTIGEN 9606
41 5CFK 1 A, B, C, D, E, F Proliferating cell nuclear antigen,Proliferating cell nuclear antigen 5661
42 3TBL 1 A, B, C Proliferating cell nuclear antigen 9606
43 3F1W 1 A Proliferating cell nuclear antigen 4932
44 1PLR 1 A PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) 4932
45 3P87 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
46 2OD8 1 A Proliferating cell nuclear antigen 4932
47 5L7C 1 A, B, C Proliferating cell nuclear antigen The original sequence starts from 1_Met. Our construct has N-ter residues -2_Gly, -1_Pro and 0_His. 9606
48 1SXJ 6 F, G, H Proliferating cell nuclear antigen 4932
49 5T9D 1 A, B, C Proliferating cell nuclear antigen 4932
50 4YHR 1 A Proliferating cell nuclear antigen 4932
51 4CS5 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 6689
52 3GPM 1 A Proliferating cell nuclear antigen 4932
53 3JA9 1 A, B, C Proliferating cell nuclear antigen 9606