Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 422
95 % 13 28 485 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 13 28 517
70 % 14 30 524
50 % 15 33 492
40 % 16 53 333
30 % 31 86 228
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3529
95 % 4 5 3374
90 % 4 5 3428
70 % 4 5 3396
50 % 4 5 3303
40 % 4 5 3209
30 % 4 5 3016

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1UD9 1 A, B, C, D DNA polymerase sliding clamp A 111955
2 5E0U 1 A, B, C Proliferating cell nuclear antigen 9606
3 4RJF 1 A, C, E Proliferating cell nuclear antigen 9606
4 1RWZ 1 A DNA polymerase sliding clamp 2234
5 2IJX 1 A, B, C, D DNA polymerase sliding clamp A 2287
6 5DAI 1 A DNA polymerase sliding clamp 1 311400
7 1U7B 1 A Proliferating cell nuclear antigen 9606
8 1RXZ 1 A DNA polymerase sliding clamp 2234
9 3LX1 1 A DNA polymerase sliding clamp 1 311400
10 3FDS 3 D DNA polymerase sliding clamp C 2287
11 5MLO 1 A, C, E Proliferating cell nuclear antigen 9606
12 3IFV 1 A, B, C PCNA 2246
13 1IZ5 1 A, B Proliferating cell nuclear antigen 2261
14 3VKX 1 A Proliferating cell nuclear antigen 9606
15 4HK1 1 A Proliferating cell nuclear antigen 7227
16 2ZVV 1 A, B Proliferating cellular nuclear antigen 1 3702
17 5E0V 1 A, B Proliferating cell nuclear antigen 9606
18 3P91 1 A Proliferating cell nuclear antigen 5759
19 4ZTD 1 A, B, C Proliferating cell nuclear antigen UNP residues 2-254 9606
20 5YCO 1 A, B, C, D Proliferating cell nuclear antigen 9606
21 1GE8 1 A PROLIFERATION CELL NUCLEAR ANTIGEN 2261
22 1PLQ 1 A PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) 4932
23 1VYM 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
24 5MOM 1 A, B, C Proliferating cell nuclear antigen 9606
25 2ZVM 1 A, B, C Proliferating cell nuclear antigen 9606
26 2IX2 2 B DNA POLYMERASE SLIDING CLAMP C 2287
27 2IX2 3 C DNA POLYMERASE SLIDING CLAMP A 2287
28 1IZ4 1 A Proliferating cell nuclear antigen 2261
29 4D2G 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 9606
30 1ISQ 1 A Proliferating Cell Nuclear Antigen 2261
31 1AXC 1 A, C, E PCNA 9606
32 2NTI 2 B, E, H DNA polymerase sliding clamp C 2287
33 2NTI 3 C, F, I DNA polymerase sliding clamp A 2287
34 5TUP 1 A, B, C Proliferating cell nuclear antigen 746128
35 5MLW 1 A, C, E Proliferating cell nuclear antigen 9606
36 5E0T 1 A, B, C Proliferating cell nuclear antigen 9606
37 5AUJ 1 A DNA polymerase sliding clamp 2261
38 1VYJ 1 A, C, E, G, I, K PROLIFERATING CELL NUCLEAR ANTIGEN 9606
39 3WGW 1 A, B Proliferating cell nuclear antigen 9606
40 3V60 2 B Proliferating cell nuclear antigen 4932
41 2ZVL 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
42 3LX2 1 A, B, C DNA polymerase sliding clamp 2 311400
43 5H0T 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
44 5A6D 1 A, B DNA POLYMERASE SLIDING CLAMP 187878
45 2ZVW 1 A, B, C, D, E, F, G, H Proliferating cell nuclear antigen 2 3702
46 3GPN 1 A Proliferating cell nuclear antigen 4932
47 4L6P 1 A, B, C Proliferating cell nuclear antigen 4932
48 3V62 2 B, E Proliferating cell nuclear antigen 4932
49 5DA7 1 A, D DNA polymerase sliding clamp 1, Proliferating cell nuclear antigen 311400
50 2ZVK 1 A, B, C Proliferating cell nuclear antigen 9606
51 2IO4 2 B, D DNA polymerase sliding clamp C 2287
52 5MAV 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
53 1RXM 1 A DNA polymerase sliding clamp 2234
54 1U76 1 A, C, E Proliferating cell nuclear antigen 9606
55 3V61 2 B Proliferating cell nuclear antigen 4932
56 2HII 2 B, Y PCNA2 (SSO1047) 2287
57 2HII 3 C, Z PCNA3 (SSO0405) 2287
58 3P83 1 A, B, C DNA polymerase sliding clamp 2234
59 5JNE 4 D, H Proliferating cell nuclear antigen 4932
60 6B8I 1 A, B, C Proliferating cell nuclear antigen 4932
61 5HAC 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
62 3A2F 2 B DNA polymerase sliding clamp 2261
63 3AIX 1 A DNA polymerase sliding clamp C 111955
64 3AIZ 2 C, D DNA polymerase sliding clamp C 111955
65 4L60 1 A Proliferating cell nuclear antigen 4932
66 5IY4 1 A, C, E Proliferating cell nuclear antigen 9606
67 5B7O 1 A, B, C, D, E, F Proliferating cell nuclear antigen 5661
68 1UL1 2 A, B, C Proliferating cell nuclear antigen 9606
69 1W60 1 A, B PROLIFERATING CELL NUCLEAR ANTIGEN 9606
70 5CFK 1 A, B, C, D, E, F Proliferating cell nuclear antigen,Proliferating cell nuclear antigen 5661
71 3TBL 1 A, B, C Proliferating cell nuclear antigen 9606
72 3F1W 1 A Proliferating cell nuclear antigen 4932
73 1PLR 1 A PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) 4932
74 3P87 1 A, B, C, D, E, F Proliferating cell nuclear antigen 9606
75 2OD8 1 A Proliferating cell nuclear antigen 4932
76 5L7C 1 A, B, C Proliferating cell nuclear antigen The original sequence starts from 1_Met. Our construct has N-ter residues -2_Gly, -1_Pro and 0_His. 9606
77 1SXJ 6 F, G, H Proliferating cell nuclear antigen 4932
78 2IZO 2 B DNA POLYMERASE SLIDING CLAMP C 2287
79 5T9D 1 A, B, C Proliferating cell nuclear antigen 4932
80 4YHR 1 A Proliferating cell nuclear antigen 4932
81 3HI8 1 A, B, C, D, E, F Proliferating cell nuclear antigen PcnA 2246
82 4CS5 1 A, B, C PROLIFERATING CELL NUCLEAR ANTIGEN 6689
83 2HIK 2 B, M, Y PCNA2 (SSO1047) 2287
84 2HIK 3 C, N, Z PCNA3 (SSO0405) 2287
85 3GPM 1 A Proliferating cell nuclear antigen 4932
86 3JA9 1 A, B, C Proliferating cell nuclear antigen 9606