Sequence Similarity Clusters for the Entities in PDB 1AXC

Entity #1 | Chains: A,C,E
PCNA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 25 455
95 % 14 29 484 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 14 29 521
70 % 15 31 524
50 % 16 34 492
40 % 18 60 337
30 % 35 102 229
Entity #2 | Chains: B,D,F
P21/WAF1 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 3139
95 % 4 5 3441
90 % 4 5 3503
70 % 4 5 3446
50 % 4 5 3364
40 % 4 5 3237
30 % 4 5 2999

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures