Sequence Similarity Clusters for the Entities in PDB 1AWS

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 87 100 118
95 % 101 114 146
90 % 102 115 154
70 % 158 172 130
50 % 196 210 111
40 % 209 227 127
30 % 216 237 133
Entity #2 | Chains: B
PEPTIDE FROM THE HIV-1 CAPSID PROTEIN protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.