Sequence Similarity Clusters for the Entities in PDB 1AWQ

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 77 101 121
95 % 87 115 147
90 % 87 116 156
70 % 142 173 133
50 % 174 211 111
40 % 183 228 128
30 % 190 238 133
Entity #2 | Chains: B
PEPTIDE FROM THE HIV-1 CAPSID PROTEIN protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.