Sequence Similarity Clusters for the Entities in PDB 1AWC

Entity #1 | Chains: D
DNA (5'-D(*AP*AP*(BRU)P*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*AP*(CBR)P*AP*CP*(CBR)P*GP*GP*A)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
DNA (5'-D(*TP*TP*CP*CP*GP*GP*(BRU)P*GP*(BRU)P*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP*AP*T)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (GA BINDING PROTEIN ALPHA) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64474
95 % 1 1 44408
90 % 1 1 42230
70 % 1 1 37205
50 % 2 6 6608
40 % 2 6 6148
30 % 2 6 5485
Entity #4 | Chains: B
PROTEIN (GA BINDING PROTEIN BETA 1) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60590
95 % 1 1 41883
90 % 1 1 39856
70 % 1 1 35191
50 % 44 79 244
40 % 60 108 201
30 % 119 200 74

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.