Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22010
95 % 2 2 19856 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 19274
70 % 2 2 17679
50 % 2 2 15386
40 % 2 2 13690
30 % 2 2 11534
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39578
95 % 8 8 5729 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 0.8
PDBFlex
90 % 8 8 5747
70 % 8 8 5604
50 % 8 8 5311
40 % 13 13 3639
30 % 13 13 3327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1AW8 2 B, E L-ASPARTATE-ALPHA-DECARBOXYLASE microheterogeneity at residue B25 562 4.1.1.11 | Details