Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22256
95 % 2 2 20057 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 19482
70 % 2 2 17855
50 % 2 2 15528
40 % 2 2 13815
30 % 2 2 11637
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40000
95 % 8 8 5801 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 0.8
PDBFlex
90 % 8 8 5814
70 % 8 8 5664
50 % 8 8 5353
40 % 13 13 3657
30 % 13 13 3344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1AW8 2 B, E L-ASPARTATE-ALPHA-DECARBOXYLASE microheterogeneity at residue B25 562 4.1.1.11 | Details 4.1.3.30 | Details