Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20997
95 % 2 2 18932 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 18429
70 % 2 2 16975
50 % 2 2 14800
40 % 2 2 13187
30 % 2 2 11097
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37827
95 % 8 8 5433
90 % 8 8 5463
70 % 8 8 5339
50 % 8 8 5077
40 % 13 13 3476
30 % 13 13 3198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TM7 1 A, C Aspartate 1-decarboxylase beta chain 562 4.1.1.11 | Details
2 1AW8 1 A, D L-ASPARTATE-ALPHA-DECARBOXYLASE 562 4.1.1.11 | Details