Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20981
95 % 2 2 18911 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 18405
70 % 2 2 16952
50 % 2 2 14780
40 % 2 2 13177
30 % 2 2 11084
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37753
95 % 8 8 5427
90 % 8 8 5458
70 % 8 8 5331
50 % 8 8 5070
40 % 13 13 3470
30 % 13 13 3195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TM7 1 A, C Aspartate 1-decarboxylase beta chain 562 4.1.1.11 | Details
2 1AW8 1 A, D L-ASPARTATE-ALPHA-DECARBOXYLASE 562 4.1.1.11 | Details