Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25315
95 % 2 2 21559 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 20930
70 % 2 2 19213
50 % 2 2 16691
40 % 2 2 14888
30 % 2 2 12761
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48522
95 % 8 8 5333
90 % 8 8 5351
70 % 8 8 5260
50 % 8 8 5028
40 % 13 13 3476
30 % 13 13 3246

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TM7 1 A, C Aspartate 1-decarboxylase beta chain 562 4.1.1.11 | Details
2 1AW8 1 A, D L-ASPARTATE-ALPHA-DECARBOXYLASE 562 4.1.1.11 | Details