Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22573
95 % 2 2 20352 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 19773
70 % 2 2 18112
50 % 2 2 15753
40 % 2 2 14015
30 % 2 2 11794
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40652
95 % 8 8 5889 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 0.8
PDBFlex
90 % 8 8 5899
70 % 8 8 5755
50 % 8 8 5435
40 % 13 13 3713
30 % 13 13 3396

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TM7 1 A, C Aspartate 1-decarboxylase beta chain 562 4.1.1.11 | Details 4.1.3.30 | Details
2 1AW8 1 A, D L-ASPARTATE-ALPHA-DECARBOXYLASE 562 4.1.1.11 | Details 4.1.3.30 | Details